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Zoo 441a : Evolution
Lab/Discussion Program


week 1. Evolutionary Convergence: strong evidence for selection, but a problem for taxonomy...........

This demonstration illustrates a central conundrum of evolutionary biology:  how much of the nature of organisms is due to selection, and how much to phyletic history?  and why does it matter?  Below is the text of the preamble to this demonstration, so that you may look at it again later, at your leisure.  For its continuation, see the sheets on display in the demonstration itself.


A recent paper of mine for the Argentine general-interest science magazine "Ciencia Hoy" (Science Today) discusses material centering around these same matters - it may be useful in your attempts to come to grips with things........


Q:  Why do organisms resemble one another?

Organisms resemble one another to differing degrees - some are very similar in lots of ways, while some seemingly have nothing in common.  Why should this be?

In a pre-evolutionary world, this question could only be answered vaguely, in terms such as divine providence, the unknowable mysteries of creation, and the like.

But after long years of more and more closely specifying the detailed structure of organisms, and seeing thereby the many ways in which they resembled or differed from one another, it became obvious to students of living creatures that there was a more or less clear structure  to the degrees of similarity and difference, which suggested a way of classifying life.  There was a system of levels of resemblance evidently inherent  in the structure of organisms:  a Natural System which was, moreover, hierarchical.  There were nested degrees of resemblance - groups containing groups containing groups, and the higher the hierarchical level, the more and more dissimilar were the creatures included.  So a more refined question was:

Q:  Why does life show this natural, nested, hierarchy of  resemblance?

Darwin suggested an answer to this:  that the relationships among organisms apparent in their structure are real  blood relationships - organisms are truly RELATED, by descent through myriad generations, across great expanses of time.  Thus, he proposed that the natural hierarchical structure of classification was there because it directly reflected the branching descent of lineages, each changing through time.  In short, he explained the similarities among organisms with the idea of evolutionary descent.  So his response to both questions was:

A:  Because organisms are related by descent, but in differing  degrees.

Once the idea of evolutionary change and descent had been accepted, it became explicit policy in biology that classifications SHOULD be constructed so as to reflect, as closely as possible, given the current state of knowledge, the true ancestor-descendant structure of what became known as the phylogenetic tree:  organisms placed close together in the classification should be close neighbours in the ramifying evolutionary genealogy - the phylogeny.  This approach had the effect of making it clear that, in assessing similarities among organisms, attention must be paid strictly to characters which really betray genealogical descent, and descent alone.  To state the other side of this coin:  in generating a useful and meaningful natural  classification, one should ignore any similarities deriving from sources other than  common ancestry - sources other than evolutionary descent.

Q:  What are other sources of similarity, besides descent?

  The primary answer to this question is:  similarities due to the action of Darwin's other great invention: the process known as Natural Selection.  Similar ways of life can evoke similar adaptations in several different evolving lineages, as similar subsets of the heritable variation available in each generation are passed down the lines of descent.  So the response is:

A:  Adaptation, through Natural Selection, to similar circumstances.

Thus, because similar characteristics may reflect similar adaptations rather than similar ancestry, such adaptive characters must be excluded in making a natural classification.  Now we have a new (and, as it turns out, very tricky) question:

Q:   How can one distinguish characters significant of proximity of  descent from those significant of adaptation?

At first, it seemed that this problem was not so difficult.  With careful analysis in morphology, embryology, paleontology and so forth, it became possible to distinguish the "fundamental" structures of organisms from "superficial" ones, thus permitting the "true" phylogenetic affinities of organisms to be roughed out.  As an example, Darwin himself established that barnacles are crustaceans, akin to shrimps and crabs, rather than being molluscs (though some of them strongly resemble limpets at first glance), through very careful dissections of adults and investigations of their larval stages.

As such work progressed, some similarities among organisms, though very impressive, could be understood as only "at the surface," reflecting adaptation rather than genetic affinity.  That is, these similar characters could be recognised as analogous (superficial), rather than homologous (fundamental.) In so doing, the phenomenon of Evolutionary Convergence became recognised:  convergent forms, despite their often great similarity, could be seen as only ecologically equivalent rather than closely related by descent - they had independently acquired similar characters through adaptation.

The existence of equivalent forms, superficially alike yet only distantly related, provided some of the more powerful evidence for the efficacy of natural selection in moulding the form of organisms so as to fit their environmental contexts.  Selection had been able, so to speak, to provide false clues to the decipherment of the phylogenetic (historical) relationships of the organisms:  the clues appeared to imply close relationship, because the characters were so similar, but close scrutiny permitted their recognition as in fact superficial, and the eventual uncovering of more fundamental characters, truly indicative of distinct histories.

But notice that the recognition of such convergence requires that distinct ancestry indeed can be clearly established:  that homologous characters can be readily distinguished from analogous ones.  But, of course, characters don't come with labels on them;  they aren't colour-coded according to homologue or analogue status, fundamental or superficial form, phylogenetic or adaptational meaning.  This distinction is one which must be inferred, and, therefore, it is a distinction prone to error.  Thus the systematists' perpetual search for the "non-adaptive character" immune from the taint of the selective process which can muddy the trail of ancestry.  So:

A:  Tricky question, that.

Q:  But why does it matter anyway?

A:  Accurate phylogenies of organisms are critical for creating and  testing hypotheses about many aspects of evolution.


So this demonstration is by way of raising and illustrating issues closely associated with this matter of resemblance - why it is there and what it means;  it concerns the issue of:

Evolutionary Convergence :The Evidence it provides for Natural Selection and the Problems it raises in the practice of Taxonomy.

To the extent that the differences among species substantially represent the operation of Natural Selection, we will expect that phylogenetic radiations will comprise arrays of species (or higher-level taxa) which each possess sets of characteristics functionally appropriate to the conditions encountered:  they will be Adaptive Radiations.  This should be more or less true, regardless of the ancestral taxa concerned;  as a consequence we would expect similar selective régimes to evoke similar kinds of species - what we call ecological  equivalents.

As an example, take a look at the accompanying figure showing the evolutionary/ecological radiation of the Hawaiian Drepanididae, a family of passerine birds closely related to the same stock that gave rise to the Cardueline finches, such as the Goldfinch.  On their arrival in the Hawaiian archipelago, they encountered a multitude of little-exploited ecological opportunities, and rapidly, and within their single family, generated an array of morphological forms comparable to many found elsewhere in the world, under similar ecological circumstances, in several other bird families.

To the extent that the ancestral taxa are phyletically (genealogically; historically) distinct, these functional attributes of equivalent species will be analogous rather than homologous;  that is, they will be evolutionarily convergent structures rather than having been inherited, as is, from ancestral forms.

Often, it is straightforward to distinguish analogue characters from homologues, and the taxonomy of the species is therefore clear.  But, if selection is very powerful, leading to very close convergence, analogues become more and more difficult to discriminate from homologues and, accordingly, taxonomic errors become more probable.

In this lab. demonstration we see a variety of examples illustrative of this issue.  As is so often the case, a historical perspective is useful:

Time and again, accepted taxonomies have been modified or even overturned when evidence comes to light that presumed homologies are, in fact, analogies - and in each case, we are offered evidence of the power of selection to erase history's footprints ................

Perhaps the most dramatic recent taxonomic overturning followed from the abandoning of the old Plant Kingdom /Animal Kingdom dichotomy, when it was realized that, say, the similarities between so-called Blue-green Algae and Green Plants was not due to any close phyletic relationship..............  Blue-green Algae aren't plants, or even algae, at all just because they possess chlorophyll, and use it to photosynthesize oxygenically.  The similarity is convergent - a matter of life-style;  Blue-green algae are actually Cyanobacteria.

You will, no doubt, recall some classic examples of evolutionary convergence from earlier courses, such as Bio 284a, or from your own reading, such as:

various kinds of "anteaters" - true S. American anteaters, Old World pangolins, Australian anteaters (marsupial numbats),  Australasian spiny  anteaters (monotremes).

various placental/marsupial parallels - thylacine & wolf;  marmot & wombat; placental and marsupial 'moles;' placental and marsupial 'cats.'

several large, high-speed, ocean carnivores - sharks, tuna, dolphins, ichthyosaurs.

It is very clear to us now, in these cases, that the similarities these taxa show are only superficial - it is clear that those similarities are due to adaptive convergence and not to common ancestry.  But this wisdom is relatively recently won...................

It really wasn't so long ago that loons and grebes were placed in the same taxonomic group, for example;  or swifts and swallows..........  but all that silliness is behind us now, isn't it? - and we may now confidently display the following examples of convergent forms - ecological equivalents...........

(From ths point, you are dependent upon the notes you made in the demonstration...........)


The 2005 list of papers to be discussed in the weeks after this demonstration follows below:


Week 2.   the analysis of adaptation

Cain, A.J. & P.M. Sheppard  1954  Natural selection in Cepaea.  Genetics  39:  89-116.

Pemberton, S.D. etal  1991  Countervailing selection in different fitness components in female Red Deer.  Evolution  45:  93-104.

Week 3.   the units of selection

Emlen, S.T.  1988  The role of kinship in helping decisions among White-fronted Bee-eaters.  Behavioral Ecology & Sociobiology  23;  305-315.

Packer, C. et al.  1991  A molecular genetic analysis of kinship and cooperation in African lions.  Nature  351:  562-565.

Week 4.   adaptive explanation

Reimchen, T.  1979  Substratum heterogeneity, crypsis and colour polymorphism in an intertidal snail. Can J. Zool.  57:  1070-1085.

Johnston, R.F.  1992  Evolution in the Rock Dove: Skeletal Morphology. Auk  109: 530-542.

Week 5.   classification & evolution

Avise, J.C. et al.  1990  Mitochondrial gene trees and the evolutionary relationship of Mallard and Black ducks.  Evolution  44:  1109-1119.

Lanyon, S. & J. Hall  1994  Re-examination of barbet monophyly using mitochondrial-DNA sequence data.  Auk  111:  389-397.

Week 6.   the idea of a species

Patton, J.L. & M.F. Smith. 1994 Paraphyly, polyphyly and the nature of species boundaries in Pocket Gophers (Thomomys). Systematic Biology 43: 11-26.

Ellsworth, D.A. et al.  1995  Phylogenetic relationships among N. American grouse inferred from Restriction Endonuclease analysis of Mitochondrial DNA.  Condor  97:  492-502.

Week 7.    speciation

Thompson, C.E., E.B. Taylor and J.D. McPhail. 1997 Parallel evolution of lake-straem pairs of Threespine sticklebacks (Gasterosteus) inferred from mitochondrial DNA variation. Evolution 51: 1955-1965.

Carroll, S.P. & C. Boyd  1992  Host race radiation in the Soapberry bug:  natural history with the history.  Evolution 46:  1052-1069.

Week 8.    the reconstruction of phylogeny

Lanyon, S.M.  1994  Polyphyly of the blackbird genus Agelaius and the importance of assumptions of monophyly in comparative studies.  Evolution  48:  679-693.

O'Brien, S.J. et al.  1985  A molecular solution to the riddle of the Giant Panda's phylogeny.  Nature  317:  140-144.

Week 9.   evolutionary biogeography

Ellsworth, D.L. et al.  1994  Historical biogeography and contemporary patterns of mitochondrial DNA variation in White-tailed deer from the southeastern United States.  Evolution  48:  122-136.

Wenink, P.W. et al.  1996  Global mitochondrial phylogeography of holarctic breeding Dunlins (Calidris alpina)  Evolution  50:  318-330.

Week 10.   rates of evolution

Boag, P. and P. Grant  1981  Intense natural selection in a population of Darwin's finches (Geospizinae) in the Galapagos.  Science  214:  82-85.

Gingerich, P.  1983  Rates of evolution:  effects of time and temporal scaling.  Science  222:  159-161.  Followed by a comment by Gould, S.  (1984) Science  226:  994-995, and a response by Gingerich (1984)  Science  226:  995-996.

Week 11.  macroevolutionary change

Williamson, P.  1981  Paleontological documentation of speciation in Cenozoic molluscs from the Turkana basin.  Nature  293:  437-443.

Bell, M.A. et al.  1985  Patterns of temporal change in single morphological characters of a Miocene stickleback fish.  Paleobiology  11:  258-271.

Week 12.   macroevolutionary trends

Jablonski, D.  1986  Background and mass extinctions:  the alternation of macroevolutionary regimes. Science  231:  129-133.

McKinney, M.  1987  Taxonomic selectivity and continuous variation in mass and background extinctions of marine taxa.  Nature  325:  143-145.

Week 13.   extinction & mass extinction

Raup, D.M.  1991  A kill curve for Phanerozoic marine species.  Paleobiology  17:  37-48.

Raup, D. & J. Sepkoski  1986  Periodic extinction of families and genera.  Science  231:  833-836.

Patterson, C. & A. Smith  1987  Is the periodicity of extinctions a taxonomic artefact? Nature  330:  248-251.
 


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